The third season began on March 14, 2009 with the three-part premiere, Transwarped, and ended on May 23, 2009. This season following the events of Transwarped focused on the Autobots' attempt to reach Cybertron in order to warn the Autobot High Council of Shockwave, who has been masquerading as Autobot Intelligence Officer Longarm Prime. Meanwhile, Megatron, Starscream, Shockwave (who replaces Blitzwing as a main character), and Lugnut plan to use the colossal Autobot Omega Supreme for constructing clones of him (dubbed as Lugnut Supremes, as they appear similar to Lugnut).

An average kid named Duncan dreams of making it big without having to wear a suit and tie to do so.

Technology brings us closer. Or perhaps it brings strangers, a little too close. But how much can you really trust someone? With a new ride share service, you never know who will be getting in a car with. Or if you'll ever get out.